Download demo data

Introduction

The demo data for tidymass is untargeted metabolomics by RPLC-QEplus (Thermo). 259 samples in total.

Subject samples: 220 blood samples. 110 control samples and 110 case samples.
QC samples: 39

1. MS1 data (mzXML format)

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Download and uncompress it:

2. MS2 data (mgf format)

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Download and uncompress it:

3. Sample information

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Download and uncompress it:

`sample_info_pos`

sample_info_pos is like below:

sample_id	injection.order	class	batch	subject_id	group
sample_QC_01	1	QC	1	NA	QC
sample_01	2	Subject	1	subject_474	Control
sample_02	3	Subject	1	subject_431	Control
sample_06	4	Subject	1	subject_414	Case
sample_07	5	Subject	1	subject_830	Control
sample_11	6	Subject	1	subject_125	Case
sample_QC_02	7	QC	1	NA	QC
sample_12	8	Subject	1	subject_387	Case
sample_13	9	Subject	1	subject_834	Case
sample_14	10	Subject	1	subject_290	Case
sample_16	11	Subject	1	subject_656	Control
sample_19	12	Subject	1	subject_333	Control
sample_20	13	Subject	1	subject_403	Case
sample_22	14	Subject	1	subject_518	Case
sample_QC_03	15	QC	1	NA	QC
sample_25	16	Subject	1	subject_854	Case
sample_26	17	Subject	1	subject_44	Case
sample_27	18	Subject	1	subject_774	Case
sample_28	19	Subject	1	subject_654	Control
sample_29	20	Subject	1	subject_257	Control
sample_30	21	Subject	1	subject_110	Case
sample_31	22	Subject	1	subject_450	Control
sample_QC_04	23	QC	1	NA	QC
sample_34	24	Subject	1	subject_391	Control
sample_35	25	Subject	1	subject_381	Control
sample_36	26	Subject	1	subject_635	Case
sample_QC_05	27	QC	1	NA	QC
sample_38	28	Subject	1	subject_476	Control
sample_39	29	Subject	1	subject_493	Case
sample_42	30	Subject	1	subject_676	Control
sample_43	31	Subject	1	subject_762	Case
sample_45	32	Subject	1	subject_258	Case
sample_46	33	Subject	1	subject_526	Control
sample_48	34	Subject	1	subject_848	Case
sample_49	35	Subject	1	subject_554	Control
sample_50	36	Subject	1	subject_389	Case
sample_QC_06	37	QC	1	NA	QC
sample_51	38	Subject	1	subject_626	Case
sample_52	39	Subject	1	subject_764	Control
sample_55	40	Subject	1	subject_526	Case
sample_56	41	Subject	1	subject_534	Control
sample_57	42	Subject	1	subject_132	Control
sample_63	43	Subject	1	subject_341	Control
sample_64	44	Subject	1	subject_764	Case
sample_QC_07	45	QC	1	NA	QC
sample_66	46	Subject	1	subject_531	Case
sample_67	47	Subject	1	subject_200	Case
sample_68	48	Subject	1	subject_748	Case
sample_71	49	Subject	1	subject_394	Control
sample_75	50	Subject	1	subject_87	Case
sample_QC_08	51	QC	1	NA	QC
sample_76	52	Subject	1	subject_158	Control
sample_77	53	Subject	1	subject_474	Case
sample_78	54	Subject	1	subject_606	Control
sample_79	55	Subject	1	subject_774	Control
sample_80	56	Subject	1	subject_834	Control
sample_QC_09	57	QC	1	NA	QC
sample_86	58	Subject	1	subject_270	Control
sample_87	59	Subject	1	subject_518	Control
sample_88	60	Subject	1	subject_780	Control
sample_89	61	Subject	1	subject_158	Case
sample_90	62	Subject	1	subject_552	Case
sample_93	63	Subject	1	subject_14	Control
sample_QC_10	64	QC	1	NA	QC
sample_94	65	Subject	1	subject_405	Case
sample_95	66	Subject	1	subject_726	Case
sample_96	67	Subject	1	subject_114	Control
sample_97	68	Subject	1	subject_716	Control
sample_98	69	Subject	1	subject_389	Control
sample_100	70	Subject	1	subject_649	Control
sample_103	71	Subject	1	subject_330	Case
sample_104	72	Subject	1	subject_287	Control
sample_107	73	Subject	1	subject_602	Control
sample_QC_11	74	QC	1	NA	QC
sample_108	75	Subject	1	subject_674	Control
sample_109	76	Subject	1	subject_405	Control
sample_110	77	Subject	1	subject_295	Control
sample_112	78	Subject	1	subject_295	Case
sample_115	79	Subject	1	subject_280	Control
sample_117	80	Subject	1	subject_793	Case
sample_QC_12	81	QC	1	NA	QC
sample_119	82	Subject	1	subject_125	Control
sample_120	83	Subject	1	subject_674	Case
sample_122	84	Subject	1	subject_819	Case
sample_123	85	Subject	1	subject_656	Case
sample_124	86	Subject	1	subject_510	Control
sample_QC_13	87	QC	1	NA	QC
sample_125	88	Subject	1	subject_149	Case
sample_127	89	Subject	1	subject_748	Control
sample_128	90	Subject	1	subject_257	Case
sample_129	91	Subject	1	subject_121	Case
sample_134	92	Subject	1	subject_525	Case
sample_135	93	Subject	1	subject_534	Case
sample_136	94	Subject	1	subject_694	Case
sample_QC_14	95	QC	1	NA	QC
sample_138	96	Subject	1	subject_848	Control
sample_141	97	Subject	1	subject_620	Case
sample_142	98	Subject	1	subject_505	Control
sample_143	99	Subject	1	subject_391	Case
sample_144	100	Subject	1	subject_429	Case
sample_145	101	Subject	1	subject_415	Case
sample_147	102	Subject	1	subject_397	Control
sample_148	103	Subject	1	subject_160	Case
sample_QC_15	104	QC	1	NA	QC
sample_149	105	Subject	1	subject_554	Case
sample_150	106	Subject	1	subject_525	Control
sample_152	107	Subject	1	subject_516	Case
sample_153	108	Subject	1	subject_573	Control
sample_156	109	Subject	1	subject_258	Control
sample_157	110	Subject	1	subject_132	Case
sample_160	111	Subject	1	subject_64	Case
sample_QC_16	112	QC	1	NA	QC
sample_163	113	Subject	2	subject_415	Control
sample_164	114	Subject	2	subject_64	Control
sample_166	115	Subject	2	subject_341	Case
sample_167	116	Subject	2	subject_188	Case
sample_QC_17	117	QC	2	NA	QC
sample_168	118	Subject	2	subject_394	Case
sample_171	119	Subject	2	subject_270	Case
sample_172	120	Subject	2	subject_205	Case
sample_173	121	Subject	2	subject_694	Control
sample_175	122	Subject	2	subject_819	Control
sample_176	123	Subject	2	subject_392	Case
sample_177	124	Subject	2	subject_17	Control
sample_178	125	Subject	2	subject_578	Control
sample_QC_18	126	QC	2	NA	QC
sample_179	127	Subject	2	subject_458	Case
sample_180	128	Subject	2	subject_284	Case
sample_181	129	Subject	2	subject_410	Control
sample_182	130	Subject	2	subject_115	Case
sample_184	131	Subject	2	subject_392	Control
sample_185	132	Subject	2	subject_505	Case
sample_QC_19	133	QC	2	NA	QC
sample_188	134	Subject	2	subject_790	Case
sample_189	135	Subject	2	subject_552	Control
sample_190	136	Subject	2	subject_828	Control
sample_193	137	Subject	2	subject_790	Control
sample_195	138	Subject	2	subject_429	Control
sample_197	139	Subject	2	subject_218	Case
sample_199	140	Subject	2	subject_870	Control
sample_201	141	Subject	2	subject_287	Case
sample_QC_20	142	QC	2	NA	QC
sample_205	143	Subject	2	subject_561	Case
sample_208	144	Subject	2	subject_153	Case
sample_209	145	Subject	2	subject_356	Case
sample_210	146	Subject	2	subject_670	Control
sample_QC_21	147	QC	2	NA	QC
sample_211	148	Subject	2	subject_561	Control
sample_212	149	Subject	2	subject_431	Case
sample_214	150	Subject	2	subject_564	Case
sample_215	151	Subject	2	subject_160	Control
sample_217	152	Subject	2	subject_247	Case
sample_219	153	Subject	2	subject_458	Control
sample_220	154	Subject	2	subject_449	Control
sample_QC_22	155	QC	2	NA	QC
sample_221	156	Subject	2	subject_121	Control
sample_222	157	Subject	2	subject_368	Case
sample_223	158	Subject	2	subject_44	Control
sample_224	159	Subject	2	subject_348	Control
sample_225	160	Subject	2	subject_783	Control
sample_226	161	Subject	2	subject_500	Control
sample_228	162	Subject	2	subject_830	Case
sample_229	163	Subject	2	subject_87	Control
sample_230	164	Subject	2	subject_670	Case
sample_QC_23	165	QC	2	NA	QC
sample_231	166	Subject	2	subject_544	Case
sample_232	167	Subject	2	subject_500	Case
sample_233	168	Subject	2	subject_488	Case
sample_234	169	Subject	2	subject_273	Case
sample_235	170	Subject	2	subject_410	Case
sample_237	171	Subject	2	subject_541	Case
sample_QC_24	172	QC	2	NA	QC
sample_243	173	Subject	2	subject_654	Case
sample_244	174	Subject	2	subject_828	Case
sample_245	175	Subject	2	subject_649	Case
sample_247	176	Subject	2	subject_676	Case
sample_QC_25	177	QC	2	NA	QC
sample_249	178	Subject	2	subject_716	Case
sample_251	179	Subject	2	subject_610	Case
sample_252	180	Subject	2	subject_403	Control
sample_253	181	Subject	2	subject_635	Control
sample_254	182	Subject	2	subject_330	Control
sample_255	183	Subject	2	subject_284	Control
sample_256	184	Subject	2	subject_533	Control
sample_257	185	Subject	2	subject_449	Case
sample_259	186	Subject	2	subject_381	Case
sample_260	187	Subject	2	subject_783	Case
sample_QC_26	188	QC	2	NA	QC
sample_261	189	Subject	2	subject_606	Case
sample_262	190	Subject	2	subject_507	Case
sample_264	191	Subject	2	subject_14	Case
sample_265	192	Subject	2	subject_153	Control
sample_268	193	Subject	2	subject_115	Control
sample_270	194	Subject	2	subject_404	Control
sample_272	195	Subject	2	subject_493	Control
sample_QC_27	196	QC	2	NA	QC
sample_274	197	Subject	2	subject_338	Control
sample_275	198	Subject	2	subject_573	Case
sample_276	199	Subject	2	subject_780	Case
sample_277	200	Subject	2	subject_428	Case
sample_282	201	Subject	2	subject_793	Control
sample_283	202	Subject	2	subject_726	Control
sample_284	203	Subject	2	subject_507	Control
sample_QC_28	204	QC	2	NA	QC
sample_285	205	Subject	2	subject_488	Control
sample_286	206	Subject	2	subject_17	Case
sample_287	207	Subject	2	subject_854	Control
sample_288	208	Subject	2	subject_348	Case
sample_289	209	Subject	2	subject_508	Case
sample_290	210	Subject	2	subject_476	Case
sample_QC_29	211	QC	2	NA	QC
sample_293	212	Subject	2	subject_368	Control
sample_297	213	Subject	2	subject_578	Case
sample_298	214	Subject	2	subject_602	Case
sample_299	215	Subject	2	subject_513	Case
sample_QC_30	216	QC	2	NA	QC
sample_304	217	Subject	2	subject_414	Control
sample_309	218	Subject	2	subject_870	Case
sample_310	219	Subject	2	subject_531	Control
sample_311	220	Subject	2	subject_114	Case
sample_313	221	Subject	2	subject_280	Case
sample_314	222	Subject	2	subject_404	Case
sample_QC_31	223	QC	2	NA	QC
sample_319	224	Subject	2	subject_516	Control
sample_320	225	Subject	2	subject_338	Case
sample_321	226	Subject	2	subject_510	Case
sample_322	227	Subject	2	subject_533	Case
sample_324	228	Subject	2	subject_273	Control
sample_325	229	Subject	2	subject_356	Control
sample_QC_32	230	QC	2	NA	QC
sample_327	231	Subject	2	subject_290	Control
sample_QC_33	232	QC	2	NA	QC
sample_47	233	Subject	2	subject_247	Control
sample_69	234	Subject	2	subject_188	Control
sample_QC_34	235	QC	2	NA	QC
sample_QC_35	236	QC	2	NA	QC
sample_QC_36	237	QC	2	NA	QC
sample_40	238	Subject	2	subject_762	Control
sample_41	239	Subject	2	subject_218	Control
sample_60	240	Subject	2	subject_110	Control
sample_99	241	Subject	2	subject_387	Control
sample_101	242	Subject	2	subject_626	Control
sample_118	243	Subject	2	subject_149	Control
sample_QC_37	244	QC	2	NA	QC
sample_174	245	Subject	2	subject_620	Control
sample_187	246	Subject	2	subject_544	Control
sample_191	247	Subject	2	subject_428	Control
sample_203	248	Subject	2	subject_564	Control
sample_204	249	Subject	2	subject_450	Case
sample_236	250	Subject	2	subject_508	Control
sample_279	251	Subject	2	subject_397	Case
sample_303	252	Subject	2	subject_205	Control
sample_QC_38	253	QC	2	NA	QC
sample_315	254	Subject	2	subject_333	Case
sample_328	255	Subject	2	subject_541	Control
sample_329	256	Subject	2	subject_610	Control
sample_QC_39	257	QC	2	NA	QC
sample_139	258	Subject	2	subject_513	Control
sample_131	259	Subject	2	subject_200	Control

`sample_info_neg`

sample_info_neg is like below:

sample_id	injection.order	class	batch	subject_id	group
sample_QC_01	1	QC	1	NA	QC
sample_01	2	Subject	1	subject_474	Control
sample_02	3	Subject	1	subject_431	Control
sample_06	4	Subject	1	subject_414	Case
sample_07	5	Subject	1	subject_830	Control
sample_11	6	Subject	1	subject_125	Case
sample_QC_02	7	QC	1	NA	QC
sample_12	8	Subject	1	subject_387	Case
sample_13	9	Subject	1	subject_834	Case
sample_14	10	Subject	1	subject_290	Case
sample_16	11	Subject	1	subject_656	Control
sample_19	12	Subject	1	subject_333	Control
sample_20	13	Subject	1	subject_403	Case
sample_22	14	Subject	1	subject_518	Case
sample_QC_03	15	QC	1	NA	QC
sample_25	16	Subject	1	subject_854	Case
sample_26	17	Subject	1	subject_44	Case
sample_27	18	Subject	1	subject_774	Case
sample_28	19	Subject	1	subject_654	Control
sample_29	20	Subject	1	subject_257	Control
sample_30	21	Subject	1	subject_110	Case
sample_31	22	Subject	1	subject_450	Control
sample_QC_04	23	QC	1	NA	QC
sample_34	24	Subject	1	subject_391	Control
sample_35	25	Subject	1	subject_381	Control
sample_36	26	Subject	1	subject_635	Case
sample_QC_05	27	QC	1	NA	QC
sample_38	28	Subject	1	subject_476	Control
sample_39	29	Subject	1	subject_493	Case
sample_42	30	Subject	1	subject_676	Control
sample_43	31	Subject	1	subject_762	Case
sample_45	32	Subject	1	subject_258	Case
sample_46	33	Subject	1	subject_526	Control
sample_48	34	Subject	1	subject_848	Case
sample_49	35	Subject	1	subject_554	Control
sample_50	36	Subject	1	subject_389	Case
sample_QC_06	37	QC	1	NA	QC
sample_51	38	Subject	1	subject_626	Case
sample_52	39	Subject	1	subject_764	Control
sample_55	40	Subject	1	subject_526	Case
sample_56	41	Subject	1	subject_534	Control
sample_57	42	Subject	1	subject_132	Control
sample_63	43	Subject	1	subject_341	Control
sample_64	44	Subject	1	subject_764	Case
sample_QC_07	45	QC	1	NA	QC
sample_66	46	Subject	1	subject_531	Case
sample_67	47	Subject	1	subject_200	Case
sample_68	48	Subject	1	subject_748	Case
sample_71	49	Subject	1	subject_394	Control
sample_75	50	Subject	1	subject_87	Case
sample_QC_08	51	QC	1	NA	QC
sample_76	52	Subject	1	subject_158	Control
sample_77	53	Subject	1	subject_474	Case
sample_78	54	Subject	1	subject_606	Control
sample_79	55	Subject	1	subject_774	Control
sample_80	56	Subject	1	subject_834	Control
sample_QC_09	57	QC	1	NA	QC
sample_86	58	Subject	1	subject_270	Control
sample_87	59	Subject	1	subject_518	Control
sample_88	60	Subject	1	subject_780	Control
sample_89	61	Subject	1	subject_158	Case
sample_90	62	Subject	1	subject_552	Case
sample_93	63	Subject	1	subject_14	Control
sample_QC_10	64	QC	1	NA	QC
sample_94	65	Subject	1	subject_405	Case
sample_95	66	Subject	1	subject_726	Case
sample_96	67	Subject	1	subject_114	Control
sample_97	68	Subject	1	subject_716	Control
sample_98	69	Subject	1	subject_389	Control
sample_100	70	Subject	1	subject_649	Control
sample_103	71	Subject	1	subject_330	Case
sample_104	72	Subject	1	subject_287	Control
sample_107	73	Subject	1	subject_602	Control
sample_QC_11	74	QC	1	NA	QC
sample_108	75	Subject	1	subject_674	Control
sample_109	76	Subject	1	subject_405	Control
sample_110	77	Subject	1	subject_295	Control
sample_112	78	Subject	1	subject_295	Case
sample_115	79	Subject	1	subject_280	Control
sample_117	80	Subject	1	subject_793	Case
sample_QC_12	81	QC	1	NA	QC
sample_119	82	Subject	1	subject_125	Control
sample_120	83	Subject	1	subject_674	Case
sample_122	84	Subject	1	subject_819	Case
sample_123	85	Subject	1	subject_656	Case
sample_124	86	Subject	1	subject_510	Control
sample_QC_13	87	QC	2	NA	QC
sample_125	88	Subject	2	subject_149	Case
sample_127	89	Subject	2	subject_748	Control
sample_128	90	Subject	2	subject_257	Case
sample_129	91	Subject	2	subject_121	Case
sample_134	92	Subject	2	subject_525	Case
sample_135	93	Subject	2	subject_534	Case
sample_136	94	Subject	2	subject_694	Case
sample_QC_14	95	QC	2	NA	QC
sample_138	96	Subject	2	subject_848	Control
sample_141	97	Subject	2	subject_620	Case
sample_142	98	Subject	2	subject_505	Control
sample_143	99	Subject	2	subject_391	Case
sample_144	100	Subject	2	subject_429	Case
sample_145	101	Subject	2	subject_415	Case
sample_147	102	Subject	2	subject_397	Control
sample_148	103	Subject	2	subject_160	Case
sample_QC_15	104	QC	2	NA	QC
sample_149	105	Subject	2	subject_554	Case
sample_150	106	Subject	2	subject_525	Control
sample_152	107	Subject	2	subject_516	Case
sample_153	108	Subject	2	subject_573	Control
sample_156	109	Subject	2	subject_258	Control
sample_157	110	Subject	2	subject_132	Case
sample_160	111	Subject	2	subject_64	Case
sample_QC_16	112	QC	2	NA	QC
sample_163	113	Subject	2	subject_415	Control
sample_164	114	Subject	2	subject_64	Control
sample_166	115	Subject	2	subject_341	Case
sample_167	116	Subject	2	subject_188	Case
sample_QC_17	117	QC	2	NA	QC
sample_168	118	Subject	2	subject_394	Case
sample_171	119	Subject	2	subject_270	Case
sample_172	120	Subject	2	subject_205	Case
sample_173	121	Subject	2	subject_694	Control
sample_175	122	Subject	2	subject_819	Control
sample_176	123	Subject	2	subject_392	Case
sample_177	124	Subject	2	subject_17	Control
sample_178	125	Subject	2	subject_578	Control
sample_QC_18	126	QC	2	NA	QC
sample_179	127	Subject	2	subject_458	Case
sample_180	128	Subject	2	subject_284	Case
sample_181	129	Subject	2	subject_410	Control
sample_182	130	Subject	2	subject_115	Case
sample_184	131	Subject	2	subject_392	Control
sample_185	132	Subject	2	subject_505	Case
sample_188	133	Subject	2	subject_790	Case
sample_189	134	Subject	2	subject_552	Control
sample_QC_19	135	QC	2	NA	QC
sample_190	136	Subject	2	subject_828	Control
sample_193	137	Subject	2	subject_790	Control
sample_195	138	Subject	2	subject_429	Control
sample_197	139	Subject	2	subject_218	Case
sample_199	140	Subject	2	subject_870	Control
sample_201	141	Subject	2	subject_287	Case
sample_QC_20	142	QC	2	NA	QC
sample_205	143	Subject	2	subject_561	Case
sample_208	144	Subject	2	subject_153	Case
sample_209	145	Subject	2	subject_356	Case
sample_210	146	Subject	2	subject_670	Control
sample_QC_21	147	QC	2	NA	QC
sample_211	148	Subject	2	subject_561	Control
sample_212	149	Subject	2	subject_431	Case
sample_214	150	Subject	2	subject_564	Case
sample_215	151	Subject	2	subject_160	Control
sample_217	152	Subject	2	subject_247	Case
sample_219	153	Subject	2	subject_458	Control
sample_220	154	Subject	2	subject_449	Control
sample_QC_22	155	QC	2	NA	QC
sample_221	156	Subject	2	subject_121	Control
sample_222	157	Subject	2	subject_368	Case
sample_223	158	Subject	2	subject_44	Control
sample_224	159	Subject	2	subject_348	Control
sample_225	160	Subject	2	subject_783	Control
sample_226	161	Subject	2	subject_500	Control
sample_228	162	Subject	2	subject_830	Case
sample_229	163	Subject	2	subject_87	Control
sample_230	164	Subject	2	subject_670	Case
sample_QC_23	165	QC	2	NA	QC
sample_231	166	Subject	2	subject_544	Case
sample_232	167	Subject	2	subject_500	Case
sample_233	168	Subject	2	subject_488	Case
sample_234	169	Subject	2	subject_273	Case
sample_235	170	Subject	2	subject_410	Case
sample_237	171	Subject	2	subject_541	Case
sample_QC_24	172	QC	2	NA	QC
sample_243	173	Subject	2	subject_654	Case
sample_244	174	Subject	2	subject_828	Case
sample_245	175	Subject	2	subject_649	Case
sample_247	176	Subject	2	subject_676	Case
sample_QC_25	177	QC	2	NA	QC
sample_249	178	Subject	2	subject_716	Case
sample_251	179	Subject	2	subject_610	Case
sample_252	180	Subject	2	subject_403	Control
sample_253	181	Subject	2	subject_635	Control
sample_254	182	Subject	2	subject_330	Control
sample_255	183	Subject	2	subject_284	Control
sample_256	184	Subject	2	subject_533	Control
sample_257	185	Subject	2	subject_449	Case
sample_259	186	Subject	2	subject_381	Case
sample_260	187	Subject	2	subject_783	Case
sample_QC_26	188	QC	2	NA	QC
sample_261	189	Subject	2	subject_606	Case
sample_262	190	Subject	2	subject_507	Case
sample_264	191	Subject	2	subject_14	Case
sample_265	192	Subject	2	subject_153	Control
sample_268	193	Subject	2	subject_115	Control
sample_270	194	Subject	2	subject_404	Control
sample_272	195	Subject	2	subject_493	Control
sample_QC_27	196	QC	2	NA	QC
sample_274	197	Subject	2	subject_338	Control
sample_275	198	Subject	2	subject_573	Case
sample_276	199	Subject	2	subject_780	Case
sample_277	200	Subject	2	subject_428	Case
sample_282	201	Subject	2	subject_793	Control
sample_283	202	Subject	2	subject_726	Control
sample_284	203	Subject	2	subject_507	Control
sample_QC_28	204	QC	2	NA	QC
sample_285	205	Subject	2	subject_488	Control
sample_286	206	Subject	2	subject_17	Case
sample_287	207	Subject	2	subject_854	Control
sample_288	208	Subject	2	subject_348	Case
sample_289	209	Subject	2	subject_508	Case
sample_290	210	Subject	2	subject_476	Case
sample_QC_29	211	QC	2	NA	QC
sample_293	212	Subject	2	subject_368	Control
sample_297	213	Subject	2	subject_578	Case
sample_298	214	Subject	2	subject_602	Case
sample_299	215	Subject	2	subject_513	Case
sample_QC_30	216	QC	2	NA	QC
sample_304	217	Subject	2	subject_414	Control
sample_309	218	Subject	2	subject_870	Case
sample_310	219	Subject	2	subject_531	Control
sample_311	220	Subject	2	subject_114	Case
sample_313	221	Subject	2	subject_280	Case
sample_314	222	Subject	2	subject_404	Case
sample_QC_31	223	QC	2	NA	QC
sample_319	224	Subject	2	subject_516	Control
sample_320	225	Subject	2	subject_338	Case
sample_321	226	Subject	2	subject_510	Case
sample_322	227	Subject	2	subject_533	Case
sample_324	228	Subject	2	subject_273	Control
sample_325	229	Subject	2	subject_356	Control
sample_QC_32	230	QC	2	NA	QC
sample_327	231	Subject	2	subject_290	Control
sample_QC_33	232	QC	2	NA	QC
sample_47	233	Subject	2	subject_247	Control
sample_69	234	Subject	2	subject_188	Control
sample_QC_34	235	QC	2	NA	QC
sample_QC_35	236	QC	2	NA	QC
sample_QC_36	237	QC	2	NA	QC
sample_40	238	Subject	2	subject_762	Control
sample_41	239	Subject	2	subject_218	Control
sample_60	240	Subject	2	subject_110	Control
sample_99	241	Subject	2	subject_387	Control
sample_101	242	Subject	2	subject_626	Control
sample_118	243	Subject	2	subject_149	Control
sample_QC_37	244	QC	2	NA	QC
sample_174	245	Subject	2	subject_620	Control
sample_187	246	Subject	2	subject_544	Control
sample_191	247	Subject	2	subject_428	Control
sample_203	248	Subject	2	subject_564	Control
sample_204	249	Subject	2	subject_450	Case
sample_236	250	Subject	2	subject_508	Control
sample_279	251	Subject	2	subject_397	Case
sample_303	252	Subject	2	subject_205	Control
sample_QC_38	253	QC	2	NA	QC
sample_315	254	Subject	2	subject_333	Case
sample_328	255	Subject	2	subject_541	Control
sample_329	256	Subject	2	subject_610	Control
sample_QC_39	257	QC	2	NA	QC
sample_139	258	Subject	2	subject_513	Control
sample_131	259	Subject	2	subject_200	Control

Session information

sessionInfo()
#> R version 4.1.2 (2021-11-01)
#> Platform: x86_64-apple-darwin17.0 (64-bit)
#> Running under: macOS Big Sur 10.16
#> 
#> Matrix products: default
#> BLAS:   /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRblas.0.dylib
#> LAPACK: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRlapack.dylib
#> 
#> locale:
#> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
#> 
#> attached base packages:
#> [1] stats     graphics  grDevices utils     datasets  methods   base     
#> 
#> other attached packages:
#> [1] magrittr_2.0.2   kableExtra_1.3.4
#> 
#> loaded via a namespace (and not attached):
#>  [1] tidyselect_1.1.1  xfun_0.29         bslib_0.3.1       purrr_0.3.4      
#>  [5] colorspace_2.0-2  vctrs_0.3.8       htmltools_0.5.2   viridisLite_0.4.0
#>  [9] yaml_2.3.4        utf8_1.2.2        rlang_1.0.1       pkgdown_2.0.2    
#> [13] jquerylib_0.1.4   pillar_1.7.0      glue_1.6.1        bit64_4.0.5      
#> [17] lifecycle_1.0.1   stringr_1.4.0     munsell_0.5.0     ragg_1.2.1       
#> [21] rvest_1.0.2       codetools_0.2-18  memoise_2.0.1     evaluate_0.15    
#> [25] knitr_1.37        tzdb_0.2.0        fastmap_1.1.0     parallel_4.1.2   
#> [29] fansi_1.0.2       highr_0.9         readr_2.1.2       scales_1.1.1     
#> [33] cachem_1.0.6      desc_1.4.0        vroom_1.5.7       webshot_0.5.2    
#> [37] jsonlite_1.7.3    systemfonts_1.0.3 fs_1.5.2          bit_4.0.4        
#> [41] textshaping_0.3.6 hms_1.1.1         digest_0.6.29     stringi_1.7.6    
#> [45] rprojroot_2.0.2   cli_3.2.0         tools_4.1.2       sass_0.4.0       
#> [49] tibble_3.1.6      crayon_1.5.0      pkgconfig_2.0.3   ellipsis_0.3.2   
#> [53] xml2_1.3.3        rmarkdown_2.11    svglite_2.0.0     httr_1.4.2       
#> [57] rstudioapi_0.13   R6_2.5.1          compiler_4.1.2

Download demo data

Xiaotao Shen (https://www.shenxt.info/)

Created on 2021-12-04 and updated on 2022-03-21

Introduction

Download demo data

1. MS1 data (mzXML format)

2. MS2 data (mgf format)

3. Sample information

`sample_info_pos`

`sample_info_neg`

Session information